Publications

publications in progress

Linker, T.M., Halavanau, A., Kroll, T., Benediktovitch, A., Zhang, Y., Michine, Y., Chuchurka, S., Abhari, Z., Ronchetti, D., Fransson, T., Weninger, C., Fuller, F.D., Aquila, A., Alonso-Mori, R., Boutet, S., Guetg, M.W. Marinelli, A., Lutman, A.A., Yabashi, M, Inoue, I., Osaka, T., Yamada, J., Inubushi, Y., Yamaguchi, G., Hara, T., Babu, G., Salpekar, D., Sayed, F.N., Ajayan, P.M., Kern, J.F., Yano, J., Yachandra, V.K., Kling, M.F., Pellegrini, C., Yoneda, H., Rohringer, N., Bergmann, U. "Attosecond inner-shell lasing at ångström wavelengths", Nature, 642, pages 934–940 (2025). 10.1038/s41586-025-09105-9 Google Scholar PubMed 

Sauthof, L., Szczepek, M., Schmidt, A., Bhowmick, A., Dasgupta, M., Mackintosh, M.J., Gul, S., Fuller, F.D., Chatterjee, R., Young, I.D., Michael, N., Heyder, N.A., Bauer, B., Koch, A., Bogacz, I., Kim, I.S., Simon, P.S., Butryn, A., Aller, P., Chukhutsina, V.U., Baxter, J.M., Hutchison, C.D.M., Liebschner, D., Poon, B., Sauter, N.K., Miller, M.D., George, N. Phillips Jr., Alonso-Mori, R., Hunter, M.S., Batyuk, A., Owada, S., Tono, K., Tanaka, R., van Thor, J.J., Krauß, N., Lamparter, T., Brewster, A.S., Schapiro, I., Orville, A.M., Yachandra, V.K., Yano, J., Hildebrandt, P., Kern, J.F., Scheerer, P. "Serial-femtosecond crystallography reveals how a phytochrome variant couples chromophore and protein structural changes" Sci Adv 11 (22). (2025) 10.1126/sciadv.adp2665 Google Scholar PubMed 

Som, J., Reese, A.J., Mitrovic, L., Kim, R.S., McBride, S., Nalawade, S.S., Aravamudhan, S., Hautier, G., Yano, J., Schlom, D.G., Suntivich, J. "Strained-Induced Morphological Reconstruction of RuO2(110) Thin-Film Electrocatalysts" J Am Chem Soc. 147 (41), 37115-37122. (2025), 10.1021/jacs.5c08607 Google Scholar PubMed 

Wei, R.J., Kirmaier, C., Holten, D., Kern, J.F., Laible, P.D., Hanson, D.K., Ranepura, G., Uddin, M.R., Ortiz-Soto, J., Gunner, M.R. "Why the electron chooses one of two symmetry-related paths in the type II bacterial photosynthetic reaction centers" Phys Chem Chem Phys. 27 (46), 24816-24826. (2025) 10.1039/d5cp01640a Google Scholar PubMed 

Mittan-Moreau, D.W., Oklejas, V., Paley, D.W., Bhowmick, A., Nguyen, R.C., Liu, A., Kern, J.F., Sauter, N.K., Brewster, A.S. "Robust error calibration for serial crystallography" Acta Crystallogr D Struct Biol. 81 (Pt 5), 265-275. (2025) 10.1107/S2059798325002852 Google Scholar PubMed 

Chatterjee, K., Lee. S.J., Kao, L.C., Doyle, M.D., Titus, C.J., Leone, S.R., Yano, J., Yachandra, V.K., Wernet, P., Kern, J.F. Probing soft X-ray induced photoreduction of a model Mn-complex at cryogenic conditions", J Synchrotron Radiat. 32(Pt 2), 399-407. (2025). 10.1021/acs.jpclett.5c00399. Google Scholar PubMed 

Kissman, E.N., Kipouros, I., Slater, J.W., Stone, E.A., Yang, A.Y., Braun, A., Ensberg, A.R., Whitten, A.M., Chatterjee, K., Bogacz, I., Yano, J., Bollinger, M.J. Jr, Chang, M.C.Y. "Dynamic metal coordination controls chemoselectivity in a radical halogenase"

Nat Chem Biol. (2025) 10.1038/s41589-025-02077-x Google Scholar PubMed 

Lee, C.C., Chatterjee, K., Yano, J., Kern, J.F., Stiebritz, M.T., Ribbe, M.W., Hu, Y. "Belt-Sulfur Mobilization as a Crucial Mechanistic Feature Shared between the Vanadium and Molybdenum Nitrogenases" Chem Catal. 5 (7), 101366. (2025) 10.1016/j.checat.2025.101366 Google Scholar PubMed 

Houle, F.A., Agbo, P., Yano, J. "Insights from designing an artificial cascade catalysis system using principles from substrate channeling in enzymes" Chem Sci. 16 (30), 13667-13677. (2025) 10.1039/d5sc02781k Google Scholar PubMed 

Chris-Okoro, I., Cherono, S., Akande, W., Nalawade, S., Liu, M., Martin, C., Craciun, V., Kim, R.S., Mahl, J., Cuk, T., Yano, J., Crumlin, E., Schall, J.D., Aravamudhan, S., Mihai, M.D., Zheng, J., Zhang, L., Hautier, G., Kumar, D. "Optical and Plasmonic Properties of High-Electron-Density Epitaxial and Oxidative Controlled Titanium Nitride Thin Films" J Phys Chem C Nanomater Interfaces. 129 (7), 3762-3774. (2025) 10.1021/acs.jpcc.4c06969 Google Scholar PubMed 

Basera, P., Zhao, Y., Garcia-Esparza, A.T., Babbe, F., Bothra, N., Vinson, J., Sokaras, D., Yano, J., Boettcher, S.W., Bajdich, M. "The Role of Cu3+ in the Oxygen Evolution Activity of Copper Oxides" J Am Chem Soc. 147 (19), 16070-16083. (2025) 10.1021/jacs.4c18147 Google Scholar PubMed 

Bogacz, I., Szilagyi, E., Makita, H., Simon, P.S., Zhang, M., Doyle, M.D., Chatterjee, K., Kretzschmar, M., Chernev, P., Croy, N., Cheah, H.M., Dasgupta, M., Nangca, I.I., Fransson, T., Bhowmick, A., Brewster, A.S., Sauter, N.K., Owada, S., Tono, K., Zerdane, S., Oggenfuss, A., Babich, D., Sander, M., Mankowsky, R., Lemke, H.T., Gee, L.B., Sato, T., Kroll, T., Messinger, J., Alonso-Mori, R., Bergmann, U., Sokaras, D., Yachandra, V.K., Kern, J.F., Yano, J. "X-ray Absorption Spectroscopy of Dilute Metalloenzymes at X-ray Free-Electron Lasers in a Shot-by-Shot Mode", International Journal of Molecular Science, 25 (15), (2025). 10.1021/acs.jpclett.5c00399. Google Scholar PubMed 

Li, H., Jana, A., Garcia-Esparza, A.T., Li, X., Kaminsky, C.J., Hamlyn, R., Prabhakar, R.R., Atwater, H.A., Ager, J.W., Sokaras, D., Yano, J., Crumlin, E.J. "When Photoelectrons Meet Gas Molecules: Determining the Role of Inelastic Scattering in Ambient Pressure X-ray Photoelectron Spectroscopy" ACS Cent Sci. 11 (1), 98-106. (2024) 10.1021/acscentsci.4c01841 Google Scholar PubMed 

Yano, J., Kern, J.F., Blankenship, R.E., Messinger, J., Yachandra, V.K. "Tribute to Kenneth Sauer (1931-2022): a mentor, a role-model, and an inspiration to all in the field of photosynthesis" Photosynth Res. 162 (2-3), 103-138. (2024) 10.1007/s11120-024-01119-0 Google Scholar PubMed 

Yano, J., Kern, J.F., Yachandra, V.K. "Structure Function Studies of Photosystem II Using X-Ray Free Electron Lasers" Annu Rev Biophys. 53 (1), 343-365. (2024) 10.1146/annurev-biophys-071723-102519 Google Scholar PubMed 

Mulfort, K.L., Concepcion, J.J., Dietzek-Ivanšić, B., Ishitani, O., Yano, J. "The physical chemistry of solar fuels catalysis" J Chem Phys. 161 (11), 110401. (2024) 10.1063/5.0234241 Google Scholar PubMed 

Kissman, E.N., Kipouros, I., Slater, J.W., Stone, E.A., Yang, A.Y., Braun, A., Ensberg, A.R., Whitten, A.M., Chatterjee, K., Bogacz, I., Yano, J., Bollinger, J.M., Chang, M.C.Y. "Dynamic metal coordination controls chemoselectivity in radical halogenases" Nature Chem Biol (2024) 10.1038/s41589-025-02077-x Google Scholar PubMed 

Eckardt, N.A., Allahverdiyeva, Y., Alvarez, C.E., Büchel, C., Burlacot, A., Cardona, T., Chaloner, E., Engel, B.D., Grossman, A.R., Harris, D., Herrmann, N., Hodges, M., Kern, J.F., Kim, T.D., Maurino, V.G., Mullineaux, C.W., Mustila, H., Nikkanen, L., Schlau-Cohen, G., Tronconi, M.A., Wietrzynski, W., Yachandra, V.K., Yano, J. "Lighting the way: Compelling open questions in photosynthesis research" Plant Cell. 36 (10), 3914-3943. (2024) 10.1093/plcell/koae203 Google Scholar PubMed 

Chen, L.X., Yano, J. "Deciphering Photoinduced Catalytic Reaction Mechanisms in Natural and Artificial Photosynthetic Systems on Multiple Temporal and Spatial Scales Using X-ray Probes" Chem Rev. 124 (9), 5421-5469. (2024) 10.1021/acs.chemrev.3c00560 Google Scholar PubMed 

Uliana, A.A., Pezoulas, E.R., Zakaria, N.I., Johnson, A.S., Smith, A., Lu, Y., Shaidu, Y., Velasquez, E.O., Jackson, M.N., Blum, M., Neaton, J.B., Yano, J., Long, J.R. "Removal of Chromium and Arsenic from Water Using Polyol-Functionalized Porous Aromatic Frameworks" J Am Chem Soc. 146 (34), 23831-23841. (2024) 10.1021/jacs.4c05728 Google Scholar PubMed 

Bindra, J.K., Malavath, T., Teferi, M.Y., Kretzschmar, M., Kern, J.F., Niklas, J., Utschig, L.M., Poluektov, O.G. "Light-Induced Charge Separation in Photosystem I from Different Biological Species Characterized by Multifrequency Electron Paramagnetic Resonance Spectroscopy", International Journal of Molecular Science, 25 (15), (2024). 10.3390/ijms25158188 Google Scholar PubMed 

Bindra, J.K., Niklas, J., Jeong, Y., Jasper, A.W., Kretzschmar, M., Kern, J.F., Utschig, L.M., Poluektov, O.G. "Coherences of Photoinduced Electron Spin Qubit Pair States in Photosystem I", The Journal of Physical Chemistry B, 127 (47), 10108-10117 (2023). 10.1021/acs.jpcb.3c06658 Google Scholar PubMed 

Bhowmick, A., Simon, P.S., Bogacz, I., Hussein, R., Zhang, M., Makita, H., Ibrahim, M., Chatterjee, R., Doyle, M.D., Cheah, H.M., Chernev, P., Fuller, F.D., Fransson, T., Alonso-Mori, R., Brewster, A.S., Sauter, N.K., Bergmann, U., Dobbek, H., Zouni, A., Messinger, J., Kern, J.F., Yachandra, V.K., Yano, J. "Going around the Kok cycle of the water oxidation reaction with femtosecond X-ray crystallography", IUCrJ, 10 (6), 642-55 (2023). 10.1107/S2052252523008928 Google Scholar PubMed 

Makita, H., Zhang, M., Kern, J.F., Yano, J. "Room temperature crystallography and X-ray spectroscopy of metalloenzymes", Methods in Enzymology, 688, 307-348 (2023). 10.1016/bs.mie.2023.07.009   Google Scholar PubMed 

Bhowmick, A., Hussein, R., Bogacz, I., Simon, P.S., Ibrahim, M., Chatterjee, R., Doyle, M.D., Cheah, M.H., Fransson, T., Chernev, P., Kim, I.-S., Makita, H., Dasgupta, M., Kaminsky, C.J., Zhang, M., Gätcke, J., Haupt, S., Nangca, I.I., Keable, S.M., Orkun, A., Tono, K., Owada, S., Gee, L.B., Fuller, F.D., Batyuk, A., Alonso-Mori, R., Holton, J.M., Paley, D.W., Moriarty, N.W., Mamedov, V., Adams, P.D., Brewster, A.S., Dobbek, H., Sauter, N.K., Bergmann, U., Zouni, A., Messinger, J., Kern, J.F., Yano, J., Yachandra, V.K.. "Structural evidence for intermediates during O2 formation in photosystem II", Nature, 617 (7961), 629–36 (2023). 10.1038/s41586-023-06038-z Google Scholar PubMed 

Bogacz, I., Makita, H., Simon, P.S., Zhang, M., Doyle, M.D., Chatterjee, R., Fransson, T., Weninger, C., Fuller, F.D., Gee, L.B., Sato, T., Seaberg, M., Alonso-Mori, R., Bergmann, U., Yachandra, V.K., Kern, J.F., Yano, J. "Room temperature X-ray absorption spectroscopy of metalloenzymes with drop-on-demand sample delivery at XFELs", Pure and Applied Chemistry, 95 (8), 891-897 (2023). 10.1515/pac-2023-0213 Google Scholar PubMed 

Doyle, M.D., Bhowmick, A., Wych, D.C., Lassalle, L., Simon, P.S., Holton, J.M., Sauter, N.K., Yachandra, V.K., Kern, J.F., Yano, J., Wall, M.E.. "Water Networks in Photosystem II Using Crystalline Molecular Dynamics Simulations and Room-Temperature XFEL Serial Crystallography", Journal of the American Chemical Society, 145 (27), 14621-14635 (2023). 10.1021/jacs.3c01412 Google Scholar PubMed 

Makita, H., Simon, P.S., Kern, J.F., Yano, J., Yachandra, V.K. "Combining on-line spectroscopy with synchrotron and X-ray free electron laser crystallography" Curr Opin Struct Biol. 80, 102604. (2023) 10.1016/j.sbi.2023.102604 Google Scholar PubMed 

Shevela, D., Kern, J.F., Govindjee, G., Messinger, J. "Solar energy conversion by photosystem II: principles and structures" Photosynth Res. 2023 Jun;156(3):279-307. 10.1007/s11120-022-00991-y Google Scholar PubMed 

Hussein, R., Ibrahim, M., Bhowmick, A., Simon, P.S., Bogacz, I., Doyle, M.D., Dobbek, H., Zouni, A., Messinger, J., Yachandra, V.K., Kern, J.F., Yano, J. "Evolutionary diversity of proton and water channels on the oxidizing side of photosystem II and their relevance to function" Photosynth Res. 158 (2), 91-107. (2023) 10.1007/s11120-023-01018-w Google Scholar PubMed 

Kong, Z. Kaminsky, C.J., Groschner, C.K., Murphy, R.A., Yu, Y., Husremović, S., Xie, L.S., Erodici, M.P., Kim, R.S., Yano, J., Bediako, D.K. "Near Room-Temperature Intrinsic Exchange Bias in an Fe Intercalated ZrSe2 Spin Glass" J Am Chem Soc. 45 (36), 20041-20052. (2023) 10.1021/jacs.3c06967 Google Scholar PubMed 

Nguyen, R.C., Davis, I., Dasgupta, M., Wang, Y., Simon, P.S., Butryn, A., Makita, H., Bogacz, I., Dornevil, K., Aller, P., Bhowmick, A., Chatterjee, R., Kim, I.S., Zhou, T., Mendez, D., Paley, D.W., Fuller, F.D., Alonso-Mori, R., Batyuk, A., Sauter, N.K., Brewster, A.S., Orville, A.M., Yachandra, V.K., Yano, J., Kern, J.F., Liu, A. "In Situ Structural Observation of a Substrate- and Peroxide-Bound High-Spin Ferric-Hydroperoxo Intermediate in the P450 Enzyme CYP121" J Am Chem Soc. 145 (46), 25120-25133. (2023) 10.1021/jacs.3c04991 Google Scholar PubMed 

Bhowmick, A., Simon, P.S., Bogacz, I., Hussein, R., Zhang, M., Makita, H., Ibrahim, M., Chatterjee, R., Doyle, M.D., Cheah, M.H., Chernev, P., Fuller, F.D., Fransson, T., Alonso-Mori, R., Brewster, A.S., Sauter, N.K., Bergmann, U., Dobbek, H., Zouni, A., Messinger, J., Kern, J.F., Yachandra, V.K., Yano, J.  "Going around the Kok cycle of the water oxidation reaction with femtosecond X-ray crystallography" IUCrJ. 10 (Pt 6), 642-655. (2023) 10.1107/S2052252523008928 Google Scholar PubMed 

Scott, A.G., Alves, Galico, D., Bogacz, I., Oyala, P.H., Yano, J., Suturina, E.A., Murugesu, M., Agapie, T. "High-Spin and Reactive Fe13 Cluster with Exposed Metal Sites" Angew Chem Int Ed Engl. 62 (49), e202313880. (2023) 10.1002/anie.202313880 Google Scholar PubMed 

Lebrette, H., Srinivas, V., John, J., Aurelius, O., Kumar, R., Lundin, D., Brewster, A.S., Bhowmick, A., Sirohiwal, A., Kim, I.S., Gul, S., Pham, C.C., Sutherlin, K.D., Simon, P.S., Butryn, A., Aller, P., Orville, A.M., Fuller, F.D., Alonso-Mori, R., Batyuk, A., Sauter, N.K., Yachandra, V.K., Yano, J., Kaila, V.R.I., Sjöberg, B.M., Kern, J.F., Roos, K., Högbom, M. "Structure of a ribonucleotide reductase R2 protein radical" Science 382 (6666), 109-113. (2023) 10.1126/science.adh8160 Google Scholar PubMed 

Doyle, M.D., Halavanau, A., Zhang, Y., Michine, Y., Everts, J., Fuller, F.D., Alonso-Mori, R., Yabashi, M., Inoue, I., Osaka, T., Yamada, J., Inubushi, Y., Hara, T., Kern, J.F., Yano, J., Yachandra, V.K., Rohringer, N., Yoneda, H., Kroll, T., Pellegrini, C., Bergmann, U. "Seeded stimulated X-ray emission at 5.9 keV", Optica, 10 (4), 513-519 (2023). 10.1364/OPTICA.485989 Google Scholar PubMed 

Yano, J., Gaffney, K.J., Gregoire, J., Hung, L., Ourmazd, A., Schrier, J., Sethian, J.A., Toma, F.M. "The case for data science in experimental chemistry: examples and recommendations" Nat Rev Chem. 6 (5), 357-370. (2022) 10.1038/s41570-022-00382-w Google Scholar PubMed 

Zhang, .Y, Kroll, T., Weninger, C., Michine, Y., Fuller, F.D., Zhu, D., Alonso-Mori, R., Sokaras, D., Lutman, A.A., Halavanau, A., Pellegrini, C., Benediktovitch, A., Yabashi, M., Inoue, I., Inubushi, Y., Osaka, T., Yamada, J., Babu, G., Salpekar, D., Sayed, F.N., Ajayan, P.M., Kern, J.F., Yano, J., Yachandra, V.K., Yoneda, H., Rohringer, N., Bergmann, U. "Generation of intense phase-stable femtosecond hard X-ray pulse pairs" Proc Natl Acad Sci USA. 119 (12), 2119616119. (2022) 10.3390/ijms25158188 Google Scholar PubMed 

Ohmer, C.J., Dasgupta, M., Patwardhan, A., Bogacz, I., Kaminsky, C.J., Doyle, M.D., Chen, P.Y., Keable, S.M., Makita, H., Simon, P.S., Massad, R., Fransson, T., Chatterjee, R., Bhowmick, A., Paley, D.W., Moriarty, N.W., Brewster, A.S., Gee, L.B., Alonso-Mori, R., Moss, F., Fuller, F.D., Batyuk, A., Sauter, N.K., Bergmann, U., Drennan, C.L., Yachandra, V.K., Yano, J., Kern, J.F., Ragsdale, S.W. "XFEL serial crystallography reveals the room temperature structure of methyl-coenzyme M reductase" J Inorg Biochem. 230, 111768. (2022) 10.1016/j.jinorgbio.2022.111768 Google Scholar PubMed 

John, J., Aurelius, O., Srinivas, V., Saura, P., Kim, I.S., Bhowmick, A., Simon, P.S., Dasgupta, M., Pham, C.C., Gul, S., Sutherlin, K.D., Aller, P., Butryn, A., Orville, A.M., Cheah, M.H., Owada, S., Tono, K., Fuller, F.D., Batyuk, A., Brewster, A.S., Sauter, N.K., Yachandra, V.K., Yano, J., Kaila, V.R.I., Kern, J.F., Lebrette, H., Högbom, M. "Redox-controlled reorganization and flavin strain within the ribonucleotide reductase R2b-NrdI complex monitored by serial femtosecond crystallography" Elife. 11, 79226. (2022) 10.7554/eLife.79226 Google Scholar PubMed 

Borgstahl, G.E.O., O'Dell, W.B., Egli, M., Kern, J.F., Kovalevsky, A., Lin, J.Y.Y., Myles, D., Wilson, M.A., Zhang, W., Zwart, P., Coates, L. "EWALD: A macromolecular diffractometer for the second target station" Rev Sci Instrum. 93 (6), 064103. (2022) 10.1063/5.0090810 Google Scholar PubMed 

Simon, P.S., Makita, H., Bogacz, I., Fuller, F.D., Bhowmick, A., Hussein, R., Ibrahim, M., Zhang, M., Chatterjee, R., Cheah, M.H., Chernev, P., Doyle, M.D., Brewster, A.S., Alonso-Mori, R., Sauter, N.K., Bergmann, U., Dobbek, H., Zouni, A., Messinger, J., Kern, J.F., Yachandra, V.K., Yano, J. "Capturing the sequence of events during the water oxidation reaction in photosynthesis using XFELs", FEBS Letters, 597 (1), 30-37 (2022). 10.1002/1873-3468.14527 Google Scholar PubMed 

Fuller, F.D., Loukianov, A., Takanashi, T., You, D., Li, Y., Ueda, K., Fransson, T., Yabashi, M., Katayama, T., Weng, T.-C., Alonso-Mori, R., Bergmann, U., Kern, J.F., Yachandra, V.K., Wernet, P., Yano, J. "Resonant X-ray emission spectroscopy from broadband stochastic pulses at an X-ray free electron laser", Communications chemistry 2021, 4, 84. 10.1038/s42004-021-00512-3 Google Scholar PubMed 

Bergmann, U., Kern, J.F., Schoenlein, R.W., Wernet, P., Yachandra, V.K., Yano, J. "Using X-ray free-electron lasers for spectroscopy of molecular catalysists and metalloenzymes", Nature Rev. Phys. 2021, 4, 2522-5820. 10.1038/s42254-021-00289-3 Google Scholar PubMed

Ye, Y., Su, H., Lee, K., Larson, D., Valero-Vidal, C., Blum, M., Yano, J., Crumlin, E.J. "Carbon dioxide adsorption and activation on the gallium phosphide surface monitored by ambient pressure x-ray photoelectron spectroscopy", J. Phys. D: Appl. Phys. 2021, 54, 234002. 10.1088/1361-6463/abec0a Google Scholar

Fransson, T., Alonso-Mori, R., Chatterjee, R., Cheah, M.H., Ibrahim, M., Hussein, R., Zhang, M., Fuller, F., Gul, S., Kim, I.S., Simon, P.S., Bogacz, I., Makita, H., de Lichtenberg, C., Song, S., Batyuk, A., Sokaras, D., Massad, R., Doyle, M.D., Britz, A., Weninger, C., Zouni, A., Messinger, J., Yachandra, V.K., Yano, J., Kern, J.F., Bergmann, U. "Effects of x-ray free-electron laser pulse intensity on the Mn K β 1,3 x-ray emission spectrum in photosystem II-A case study for metalloprotein crystals and solutions" Struct Dyn. 8 (6), 064302. (2021) 10.1063/4.0000130 Google Scholar PubMed 

Butryn, A., Simon, P.S., Aller, P., Hinchliffe, P., Massad, R.N., Leen, G., Tooke, C.L., Bogacz, I., Kim, I.S., Bhowmick, A., Brewster, A.S., Devenish, N.E., Brem, J., Kamps, J.J.A.G., Lang, P.A., Rabe, P., Axford, D., Beale, J.H., Davy, B., Ebrahim, A., Orlans, J., Storm, S.L.S., Zhou, T., Owada, S., Tanaka, R., Tono, K., Evans, G., Owen, R.L., Houle, F.A., Sauter, N.K., Schofield, C.J., Spencer, J., Yachandra, V.K., Yano, J., Kern, J.F., Orville, A.M. "An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography" Nat Commun. 12 (1), 4461. (2021) 10.1038/s41467-021-24757-7 Google Scholar PubMed 

Rabe, P., Kamps, J.J.A.G., Sutherlin, K.D., Linyard, J.D.S., Aller, P., Pham, C.C., Makita, H., Clifton, I., McDonough, M.A., Leissing, T.M., Shutin, D., Lang, P.A., Butryn, A., Brem, J., Gul, S., Fuller, F.D., Kim, I.S., Cheah, M.H., Fransson, T., Bhowmick, A., Young, I.D., O'Riordan, L., Brewster, A.S., Pettinati, I., Doyle, M., Joti, Y., Owada, S., Tono, K., Batyuk, A., Hunter, M.S., Alonso-Mori, R., Bergmann, U., Owen, R.L., Sauter, N.K., Claridge, T.D.W., Robinson, C.V., Yachandra, V.K., Yano, J., Kern, J.F., Orville, A.M., Schofield, C.J. "X-ray free-electron laser studies reveal correlated motion during isopenicillin N synthase catalysis" Sci Adv. 2021 Aug 20;7(34):eabh0250. 10.1126/sciadv.abh0250 Google Scholar PubMed 

Tanifuji, K., Jasniewski, A.J., Villarreal, D., Stiebritz, M.T., Lee, C.C., Wilcoxen, J., Okhi, Y., Chatterjee, R., Bogacz, I., Yano, J., Kern, J.F., Hedman, B., Hodgson, K.O., Britt, R.D., Hu, Y., Ribbe, M.W. "Tracing the incorporation of the "ninth sulfur" into the nitrogenase cofactor precursor with selenite and tellurite" Nat Chem. (12), 1228-1234. (2021) 10.1038/s41557-021-00799-8 Google Scholar PubMed 

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Yang, J., Walczak, K., Anzenberg, E., Toma, F.M., Yuan, G., Beeman, J., Schwartzberg, A., Lin, Y., Hettick, M., Javey, A., Ager, J.W., Yano, J., Frei, H., Sharp, I.D. "Efficient and sustained photoelectrochemical water oxidation by cobalt oxide/silicon photoanodes with nanotextured interfaces", J Am Chem Soc 2014, 136, 6191-6194. 10.1021/ja501513t Google Scholar PubMed

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Jiang, N., Bogoev, L., Popova, M., Gul, S., Yano, J., Sun, Y.J. "Electrodeposited nickel-sulfide films as competent hydrogen evolution catalysts in neutral water", J Mater Chem A Mater Energy Sustain 2014, 2, 19407-19414. 10.1039/C4TA04339A Google Scholar

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Glöckner, C., Kern, J.F., Broser, M., Zouni, A., Yachandra, V.K., Yano, J. "Structural changes of the oxygen-evolving complex in photosystem II during the catalytic cycle", J Biol Chem 2013, 288, 22607-22620. 10.1074/jbc.M113.476622 Google Scholar PubMed

Gorlin, Y., Lassalle-Kaiser, B., Benck, J.D., Gul, S., Webb, S.M., Yachandra, V.K., Yano, J., Jaramillo, T.F. "In situ X-ray absorption spectroscopy investigation of a bifunctional manganese oxide catalyst with high activity for electrochemical water oxidation and oxygen reduction", J Am Chem Soc 2013, 135, 8525-8534. 10.1021/ja3104632 Google Scholar PubMed

Narang, P., Chen, S., Coronel, N.C., Gul, S., Yano, J., Wang, L.W., Lewis, N.S., Atwater, H.A. "Bandgap Tunability in Zn(Sn,Ge)N2 Semiconductor Alloys", Adv Mater 2013 10.1002/adma.201304473 Google Scholar PubMed

Sun, Y., Liu, C., Grauer, D.C., Yano, J., Long, J.R., Yang, P., Chang, C.J. "Electrodeposited cobalt-sulfide catalyst for electrochemical and photoelectrochemical hydrogen generation from water", J Am Chem Soc 2013, 135, 17699-17702. 10.1021/ja4094764 Google Scholar PubMed

Service, R.J., Yano, J., Dilbeck, P.L., Burnap, R.L., Hillier, W., Debus, R.J. "Participation of glutamate-333 of the D1 polypeptide in the ligation of the Mn4CaO5 cluster in photosystem II", Biochemistry 2013, 52, 8452-8464. 10.1021/bi401339f Google Scholar PubMed

Kanady, J.S., Tran, R., Stull, J.A., Lu, L., Stich, T.A., Day, M.W., Yano, J., Britt, R.D., Agapie, T. "Role of oxide incorporation and ligand lability in expanding redox accessibility of structurally related Mn4 clusters", Chem Sci 2013, 4, 3986-3996. 10.1039/C3SC51406D Google Scholar PubMed

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Tsui, E.Y., Tran, R., Yano, J., Agapie, T. "Redox-inactive metals modulate the reduction potential in heterometallic manganese-oxido clusters", Nat Chem 2013, 5, 293-299. 10.1038/nchem.1578 Google Scholar PubMed

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Togashi, H., Yano, J., Yachandra, V.K., Kohzuma, T. "X-ray Absorption Spectroscopy of an Unusual Plastocyanin from a Fern, Dryopteris crassirhizoma", Chem Lett 2013, 42, 89-90. 10.1246/cl.2013.89 Google Scholar

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Lacy, D.C., Park, Y.J., Ziller, J.W., Yano, J., Borovik, A.S. "Assembly and properties of heterobimetallic Co(II/III)/Ca(II) complexes with aquo and hydroxo ligands", J Am Chem Soc 2012, 134, 17526-17535. 10.1021/ja304525n Google Scholar PubMed

Bediako, D.K., Lassalle-Kaiser, B., Surendranath, Y., Yano, J., Yachandra, V.K., Nocera, D.G. "Structure-activity correlations in a nickel-borate oxygen evolution catalyst", J Am Chem Soc 2012, 134, 6801-6809. 10.1021/ja301018q Google Scholar PubMed

Mukherjee, S., Stull, J.A., Yano, J., Stamatatos, T.C., Pringouri, K., Stich, T.A., Abboud, K.A., Britt, R.D., Yachandra, V.K., Christou, G. "Synthetic model of the asymmetric [Mn3CaO4] cubane core of the oxygen-evolving complex of photosystem II", Proc Natl Acad Sci USA 2012, 109, 2257-2262. 10.1073/pnas.11152901 Google Scholar PubMed

Taguchi, T., Gupta, R., Lassalle-Kaiser, B., Boyce, D.W., Yachandra, V.K., Tolman, W.B., Yano, J., Hendrich, M.P., Borovik, A.S. "Preparation and properties of a monomeric high-spin Mn(V)-oxo complex", J Am Chem Soc 2012, 134, 1996-1999. 10.1021/ja210957u Google Scholar PubMed

Bigi, J.P., Harman, W.H., Lassalle-Kaiser, B., Robles, D.M., Stich, T.A., Yano, J., Britt, R.D., Chang, C.J. "A high-spin iron(IV)-oxo complex supported by a trigonal nonheme pyrrolide platform", J Am Chem Soc 2012, 134, 1536-1542. 10.1021/ja207048h Google Scholar PubMed

Soo, H.S., Macnaughtan, M.L., Weare, W.W., Yano, J., Frei, H. "EXAFS Spectroscopic Analysis of Heterobinuclear TiOMn Charge-Transfer Chromophore in Mesoporous Silica", J Phys Chem C 2011, 115, 24893-24905. 10.1021/jp208419q Google Scholar

Tang, M.L., Grauer, D.C., Lassalle-Kaiser, B., Yachandra, V.K., Amirav, L., Long, J.R., Yano, J., Alivisatos, A.P. "Structural and electronic study of an amorphous MoS3 hydrogen-generation catalyst on a quantum-controlled photosensitizer", Angew Chem Int Ed Engl 2011, 50, 10203-10207. 10.1002/ange.201104412 Google Scholar PubMed

Service, R.J., Yano, J., McConnell, I., Hwang, H.J., Niks, D., Hille, R., Wydrzynski, T., Burnap, R.L., Hillier, W., Debus, R.J. "Participation of glutamate-354 of the CP43 polypeptide in the ligation of manganese and the binding of substrate water in photosystem II", Biochemistry 2011, 50, 63-81. 10.1021/bi1015937 Google Scholar PubMed

Yano, J., Walker, L.M., Strickler, M.A., Service, R.J., Yachandra, V.K., Debus, R.J. "Altered structure of the Mn4Ca cluster in the oxygen-evolving complex of photosystem II by a histidine ligand mutation", J Biol Chem 2011, 286, 9257-9267. 10.1074/jbc.M110.205740 Google Scholar PubMed

Yachandra, V.K., Yano, J. "Calcium in the oxygen-evolving complex: Structural and mechanistic role determined by X-ray spectroscopy", J Photochem Photobiol B 2011, 104, 51-59. 10.1016/j.jphotobiol.2011.02.019 Google Scholar PubMed

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Kanan, M.W., Yano, J., Surendranath, Y., Dinca, M., Yachandra, V.K., Nocera, D.G. "Structure and Valency of a Cobalt-Phosphate Water Oxidation Catalyst Determined by in Situ X-ray Spectroscopy", J Am Chem Soc 2010, 132, 13692-13701. 10.1021/ja1023767 Google Scholar PubMed

Murray, L.J., Dinca, M., Yano, J., Chavan, S., Bordiga, S., Brown, C.M., Long, J.R. "Highly-selective and reversible O2 binding in Cr3(1,3,5-benzenetricarboxylate)2", J Am Chem Soc 2010, 132, 7856-7857. 10.1021/ja1027925 Google Scholar PubMed

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Tian, L., Koshland, C.P., Yano, J., Yachandra, V.K., Yu, I.T., Lee, S.C., Lucas, D., (2009) "Carbon-Centered Free Radicals in Particulate Matter Emissions from Wood and Coal Combustion", Energy Fuels 2009, 23, 2523-2526. doi.org Google Scholar PubMed

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Yano, J., Yachandra, V.K., (2008) "Where water is oxidized to dioxygen: structure of the photosynthetic Mn4Ca cluster from X-ray spectroscopy", Inorg Chem 2008, 47, 1711-1726. doi.org Google Scholar PubMed

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Yano, J., Kern, J., Pushkar, Y., Sauer, K., Glatzel, P., Bergmann, U., Messinger, J., Zouni, A., Yachandra, V.K., (2008) "High-resolution structure of the photosynthetic Mn4Ca catalyst from X-ray spectroscopy", Philos Trans R Soc Lond B Biol Sci 2008, 363, 1139-1147. doi.org Google Scholar PubMed

Yano, J., Pushkar, Y., Messinger, J., Bergmann, U., Glatzel, P., Yachandra, V.K., (2008) "Electronic Structure and Oxidation State Changes in the Mn4Ca Cluster of Photosystem II", Photosynthesis: Energy from the Sun 2008 4 529-532. doi.org Google Scholar PubMed

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Broser, M., Kern, J., Zimmermann, K., Yano, J., Yachandra, V.K., Loll, B., Biesiadka, J., Saenger, W., Zouni, A., (2008) "Photosystem II -- Details of Cofactor-Protein Interactions in the Light of the 3 A Resolution Crystal Structure", Photosynthesis: Energy from the Sun 2008 4 373-376. doi.org Google Scholar PubMed

Kulik, L.V., Epel, B., Zein, S., Yano, J., Kern, J., Pushkar, Y., Zouni, A., Yachandra, V.K., Neese, F., Lubitz, W., Messinger, J., (2008) "Electronic and Geometric Structures of the Mn4OxCa Cluster in the S0 and S2 States of the Oxygen-evolving Complex of Photosystem II Based on Pulse 55Mn-ENDOR Spectroscopy and DFT Calculations", Photosynthesis: Energy from the Sun, 14th International Congress on Photosynthesis (eds., Allen, J. F., Gantt, E., Golbeck, J. H., and Osmond, B.), Springer (2008). doi.org Google Scholar PubMed

Yano, J., Robblee, J., Pushkar, Y., Marcus, M.A., Bendix, J., Workman, J.M., Collins, T.J., Solomon, E.I., George, S.D., Yachandra, V.K., (2007) "Polarized X-ray absorption spectroscopy of single-crystal Mn(V) complexes relevant to the oxygen-evolving complex of photosystem II", J Am Chem Soc 2007, 129, 12989-13000. doi.org Google Scholar PubMed

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Pushkar, Y., Yano, J., Glatzel, P., Messinger, J., Lewis, A., Sauer, K., Bergmann, U., Yachandra, V.K., (2007) "Structure and orientation of the Mn4Ca cluster in plant photosystem II membranes studied by polarized range-extended x-ray absorption spectroscopy", J Biol Chem 2007, 282, 7198-7208. doi.org Google Scholar PubMed

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Yano, J., Pushkar, Y., Glatzel, P., Lewis, A., Sauer, K., Messinger, J., Bergmann, U., Yachandra, V.K., (2005) "High-resolution Mn EXAFS of the oxygen-evolving complex in photosystem II: structural implications for the Mn4Ca cluster", J Am Chem Soc 2005, 127, 14974-14975. doi.org Google Scholar PubMed

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